PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06405

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 245aa MW: 27723.4 Da PI: 6.5459

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06405	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.4	1.1e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRrng++KKA ELSvLCdaevaviifsstgklye+s+ OIW06405 9 KKIENLNSRQVTFSKRRNGLMKKARELSVLCDAEVAVIIFSSTGKLYEFSN 59 68***********************************************95 PP
2	K-box	60	9.9e-21	91	171	18	98
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ Lk+ei +L++ +++G++L+ LslkeLq+Le+qL++++ +++kK+++lleq+++++ +e+++ en++Lrk+l OIW06405 91 ESDSNLLKDEITKLRSAYLRMIGKELDGLSLKELQHLENQLNEGILAVKDKKEQVLLEQLRRSRLQEEKAMLENESLRKQL 171 567889*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGRGKIEIKK IENLNSRQVT FSKRRNGLMK KARELSVLCD AEVAVIIFSS TGKLYEFSNS 60 SMEHTLSRYS RGLDLECGEQ SSDEPPTMVI ESDSNLLKDE ITKLRSAYLR MIGKELDGLS 120 LKELQHLENQ LNEGILAVKD KKEQVLLEQL RRSRLQEEKA MLENESLRKQ LLEMENSTRS 180 QFLQLNSLDR PNTINCSKFL SNCASEDNEL SDASLQLGLS TDYGRNRKTL KIEPCNGSGS 240 QVASQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57390.1	1e-55	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIW06405