PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW06542
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 239aa    MW: 27547.3 Da    PI: 8.4458
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW06542genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.51.4e-31959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  OIW06542  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59
              79***********************************************96 PP
2K-box77.43.7e-26811706100
     K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                ++ +++ ++s+++e+ kLk++ e+Lqr+qR+llGedL++L+ k+L+qLe+qL++slk+     ++++l+q+++lq+ke++l e+n+ L++klee
  OIW06542  81 VNKPSKELEQSSYREYLKLKARFESLQRTQRNLLGEDLGPLNTKDLEQLERQLDSSLKH-----TQFMLDQLSDLQNKEQMLVEANRGLTMKLEE 170
               5566777899***********************************************87.....8***************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFCSC  60
TSGMLKTLER YQKCSYGAVE VNKPSKELEQ SSYREYLKLK ARFESLQRTQ RNLLGEDLGP  120
LNTKDLEQLE RQLDSSLKHT QFMLDQLSDL QNKEQMLVEA NRGLTMKLEE INSRNQYRQW  180
EDAEQSMQYG AQNPHSQGFF QPLECNPTLQ IGYNSVASDQ LTAATQGQQV NGFIPGWML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.11e-120MIKC_MADS family protein