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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW06561 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | NAC | ||||||||
| Protein Properties | Length: 340aa MW: 39393 Da PI: 6.5054 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 171.4 | 2.8e-53 | 7 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
+ppGfrFhPt+eelv +yLk+k+++ k++l +vi e+d+yk+ePwd++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v+s k++
OIW06561 7 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVIVEIDLYKIEPWDIQDrckLGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVMS-KNR 105
69****************************.99**************952432234677**************************************.899 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+g++ktLvfykgrap+g+k+dW+mheyr
OIW06561 106 IIGMRKTLVFYKGRAPNGRKSDWIMHEYRH 135
9***************************95 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 340 aa Download sequence |
MNLESCVPPG FRFHPTEEEL VGYYLKRKIN SLKIDLDVIV EIDLYKIEPW DIQDRCKLGY 60 EEQNEWYFFS HKDKKYPTGT RTNRATVAGF WKATGRDKAV MSKNRIIGMR KTLVFYKGRA 120 PNGRKSDWIM HEYRHQTSEH APPHEEGWVV CRAFRKPTPS QRPGFEPWCN SSQHQHYFRD 180 QSHARPLTIA DILNETHNVL HSTEDTSFNS FPFSSEQQEF LPNQNVIMDH KQLIELPQLD 240 SPTASLSATL AIKECNQLQY HNNNGLTIEE YCSDERCNNN NNGQVGGVDW KSLDNLFASQ 300 LTDSSEVYFS HQNLPLMMPH SHDLQAQNQA SNILGCFPDL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G71930.1 | 1e-118 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW06561 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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