PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06733

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 444aa MW: 49764.7 Da PI: 9.5159

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06733	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.3e-05	69	91	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OIW06733 69 FVCEICKKGFQRDQNLQLHRRGH 91 89*******************88 PP
2	zf-C2H2	11.7	0.00077	145	167	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ OIW06733 145 WKCDKCSKIYAVQSDWKAHSKTC 167 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MFPAPMSNST PLSEEASVLS SDARIHQDLV STISPQQKIK KKRSLPGNPD PDAEVIALSP 60 KTLLATNRFV CEICKKGFQR DQNLQLHRRG HNLPWKLKQR NNKEVKKRAY VCPEPSCVHH 120 NPSRALGDLT GIKKHYCRKH GEKKWKCDKC SKIYAVQSDW KAHSKTCGTR EYRCDCGTLF 180 SRKDSFITHR AFCDALAEES ARISANQIAN NSTNPLSQSL FLFPTTQQNN FQNHFTTTLN 240 PSWDPSHQNP NPSNFATTLH NSIKPEAQTF HIPNNNNNPS FLHHPKNIIT SSPFRNLQVC 300 TQNPSNSCTS AYLSATALLQ KAATVGAAAI TGPNATVSIG QQQHVTHFGT VTTQLNNSVV 360 PDHNHYNMKR LNKNETRDFL GLTNGGNNVD VSMNMKDMLT FTGSVDYQNQ PYENHHHQHS 420 QFKYQQQGFG FVGTTTAPES WGNC

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MFPAPMSNST PLSEEASVLS SDARIHQDLV STISPQQKIK KKRSLPGNPD PDAEVIALSP  60
KTLLATNRFV CEICKKGFQR DQNLQLHRRG HNLPWKLKQR NNKEVKKRAY VCPEPSCVHH  120
NPSRALGDLT GIKKHYCRKH GEKKWKCDKC SKIYAVQSDW KAHSKTCGTR EYRCDCGTLF  180
SRKDSFITHR AFCDALAEES ARISANQIAN NSTNPLSQSL FLFPTTQQNN FQNHFTTTLN  240
PSWDPSHQNP NPSNFATTLH NSIKPEAQTF HIPNNNNNPS FLHHPKNIIT SSPFRNLQVC  300
TQNPSNSCTS AYLSATALLQ KAATVGAAAI TGPNATVSIG QQQHVTHFGT VTTQLNNSVV  360
PDHNHYNMKR LNKNETRDFL GLTNGGNNVD VSMNMKDMLT FTGSVDYQNQ PYENHHHQHS  420
QFKYQQQGFG FVGTTTAPES WGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-124	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW06733