PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06785

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 539aa MW: 59496.4 Da PI: 8.8323

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06785	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H OIW06785 51 FICEVCNKGFQREQNLQLHRRGH 73 89*******************88 PP
2	zf-C2H2	11.1	0.0012	127	149	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + OIW06785 127 WKCDKCSKKYAVQSDWKAHSKIC 149 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MAASSSSVSL FGFRETDQNQ NQMNQQHSSS ATPPAPPQKK KRNQPGTPSK FICEVCNKGF 60 QREQNLQLHR RGHNLPWKLK QKTTKDARRK VYLCPEPTCI HHDPSRALGD LTGIKKHYYR 120 KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYRCDCGT IFSRRDSFIT HRAFCDALAQ 180 ESERQPPNLS SANHLYGTNH SNMALALSQV APQMSNIQDQ INNNQSTDLL HHGDNIGPIE 240 QFNHHSSLHD GSSSFKPLHQ TMQHSPPSFF MDADNLNQNY NHPDQSRQQQ QQQGLVQQNK 300 VPFQGLMHLS HDGFNNHHNN SPSPDAGSHN LFNHLFLSTN NSNNSFSELF NSANGSIGGG 360 NEATNFFTTG ISTMGGHHHQ QIITSSAPSL FSTSLQSNNS VGNTHHMSAT ALLQKVAQMS 420 ATSSNSTTSL LKNFGSITSS SSIFGGIENN NSNMQDLMNT FAASGNTSIL EDGGSLGLTG 480 FEPYDDKSNR RKEPRVHGVN IGGSDDRLTR DFLGVGEIVR SMNGGREQHG HGGSGGNLH

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MAASSSSVSL FGFRETDQNQ NQMNQQHSSS ATPPAPPQKK KRNQPGTPSK FICEVCNKGF  60
QREQNLQLHR RGHNLPWKLK QKTTKDARRK VYLCPEPTCI HHDPSRALGD LTGIKKHYYR  120
KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYRCDCGT IFSRRDSFIT HRAFCDALAQ  180
ESERQPPNLS SANHLYGTNH SNMALALSQV APQMSNIQDQ INNNQSTDLL HHGDNIGPIE  240
QFNHHSSLHD GSSSFKPLHQ TMQHSPPSFF MDADNLNQNY NHPDQSRQQQ QQQGLVQQNK  300
VPFQGLMHLS HDGFNNHHNN SPSPDAGSHN LFNHLFLSTN NSNNSFSELF NSANGSIGGG  360
NEATNFFTTG ISTMGGHHHQ QIITSSAPSL FSTSLQSNNS VGNTHHMSAT ALLQKVAQMS  420
ATSSNSTTSL LKNFGSITSS SSIFGGIENN NSNMQDLMNT FAASGNTSIL EDGGSLGLTG  480
FEPYDDKSNR RKEPRVHGVN IGGSDDRLTR DFLGVGEIVR SMNGGREQHG HGGSGGNLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	6e-88	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW06785