PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06828

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 165aa MW: 18232.7 Da PI: 8.1492

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06828	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H OIW06828 32 FECKTCNRQFPSFQALGGHRASH 54 89**********99999998887 PP
2	zf-C2H2	11	0.0013	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H OIW06828 80 HECSICGLEFSIGQALGGHMRRH 102 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MANYLMLLSC GGEFETTYSN SSNNNNNNNR VFECKTCNRQ FPSFQALGGH RASHKKLRLM 60 GEEGNQIMVH GDSPPKPKIH ECSICGLEFS IGQALGGHMR RHRVPINSNG NIQSSTTMVI 120 TSSSSSVDTK INKANNSKKL LFLDLNLTPL ENDVEILIPL VDCHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-32	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW06828