PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06861

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 458aa MW: 49923.6 Da PI: 7.1957

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06861	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.6	1.4e-10	242	287	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L++l+P+ +k s +++L +Av++Ik Lq OIW06861 242 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 287 689*******************7....688***************9 PP
2	HLH	32.6	1.4e-10	399	444	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L++l+P+ +k s +++L +Av++Ik Lq OIW06861 399 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 444 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MYSSSSSSSS QTGLTRYASA PSSLLTTAVD AVISAGSHPL PPQYFSGESS EPNFQALGGG 60 GSSSNLIRQK SSPAGFLNHL ATTLHHPDNA GFTITRGAST YSSHGHGISN SGHAHTVSRL 120 KTQLSFTGQD SLSQISEVSE NIEEGTTSDN GHHRPVHSYA TTSFGMEPWD NSNSIVFSAP 180 PTKRSKNMDG DILNCLNALE SQFSLPQTTL EMATVENLLH IPEDSVPCKI RAKRGCATHP 240 RSIAERERRT RISGKLKKLQ DLVPNMDKQT SYSDMLDLAV QHIKGLQSQV QISEVSENIE 300 EGTTSDNGHH RPVHSYATTS FGMEPWDNSN SIVFSAPPTK RSKNMDGDIL NCLNALESQF 360 SLPQTTLEMA TVENLLHIPE DSVPCKIRAK RGCATHPRSI AERERRTRIS GKLKKLQDLV 420 PNMDKQTSYS DMLDLAVQHI KGLQSQVQVC NNTLPFTV

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MYSSSSSSSS QTGLTRYASA PSSLLTTAVD AVISAGSHPL PPQYFSGESS EPNFQALGGG  60
GSSSNLIRQK SSPAGFLNHL ATTLHHPDNA GFTITRGAST YSSHGHGISN SGHAHTVSRL  120
KTQLSFTGQD SLSQISEVSE NIEEGTTSDN GHHRPVHSYA TTSFGMEPWD NSNSIVFSAP  180
PTKRSKNMDG DILNCLNALE SQFSLPQTTL EMATVENLLH IPEDSVPCKI RAKRGCATHP  240
RSIAERERRT RISGKLKKLQ DLVPNMDKQT SYSDMLDLAV QHIKGLQSQV QISEVSENIE  300
EGTTSDNGHH RPVHSYATTS FGMEPWDNSN SIVFSAPPTK RSKNMDGDIL NCLNALESQF  360
SLPQTTLEMA TVENLLHIPE DSVPCKIRAK RGCATHPRSI AERERRTRIS GKLKKLQDLV  420
PNMDKQTSYS DMLDLAVQHI KGLQSQVQVC NNTLPFTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05805.1	2e-67	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW06861