PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW06883
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 164aa    MW: 18375.8 Da    PI: 7.2044
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW06883genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26097.91e-302102196
    DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 
               +C++C+vlr++C++dC+l+ +f     p++q++++ +v+k+FG+++++++++++p+++r+++++slvyeA  r+ +Pv+G+vg++++++++l+ql +e +l
  OIW06883   2 SCNGCRVLRKGCSDDCMLRHCFlwienPQAQAHATLFVAKFFGRATLMSFISSVPTNQRSALFESLVYEAVGRTINPVNGVVGLLWSGNWHLCQLGVEKVL 102
               6*********************************************************************************************9988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MSCNGCRVLR KGCSDDCMLR HCFLWIENPQ AQAHATLFVA KFFGRATLMS FISSVPTNQR  60
SALFESLVYE AVGRTINPVN GVVGLLWSGN WHLCQLGVEK VLKGGSLLNP NPHHHDEEEV  120
ERVMVSHQAS QEESETTTFG SSTPQVDSDS HQKTQRRKLL TLFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.17e-58LBD family protein