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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW07041 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 272aa MW: 31026.9 Da PI: 6.4174 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 62.5 | 8.4e-20 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd ll+++v+ +G g+W++Ia+ g++Rt+k+c++rw++yl
OIW07041 34 KGPWTEEEDSLLINYVNVHGEGHWNSIASIAGLKRTGKSCRLRWLNYL 81
79********************************************97 PP
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| 2 | Myb_DNA-binding | 46.9 | 6.5e-15 | 87 | 130 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
OIW07041 87 RGNITLHEQLLILELHSRWGNR-WSKIAEELP-GRTDNEIKNYWRT 130
7899******************.*********.***********96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 272 aa Download sequence |
MDTEYTRNVH MMRSLSDCGS SATYESEEHM VMKKGPWTEE EDSLLINYVN VHGEGHWNSI 60 ASIAGLKRTG KSCRLRWLNY LRPNVRRGNI TLHEQLLILE LHSRWGNRWS KIAEELPGRT 120 DNEIKNYWRT RVLKQAKQLK CDVNSKKFRD TMRFVWMPRL MEQIQASSSH GHSQTTMFSN 180 TQAHTEPCVT IPTMLSVPSS DSMSYNLMGG GCSFSSSEPD SLEKGSISTS CILEPKDYSG 240 VQVVEPSNDF GGADLWTDEN ICFLQQLLAD DY |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G47190.1 | 6e-81 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW07041 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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