PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW07065
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 156aa    MW: 18216.6 Da    PI: 10.3234
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW07065genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.31.9e-131248440
              -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
    SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
               ++  r+ tf kR++gi KK +EL +LC+++++ ii 
  OIW07065 12 IDDNARKATFKKRKKGIVKKVSELTILCGIDACAIIS 48
              5677899**************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MTRKKVKLAY IIDDNARKAT FKKRKKGIVK KVSELTILCG IDACAIISNP YDSQAEVWPN  60
PKGAKHIIKR YLKTPVIDET KNMNQERFIM QKISKALEKL DKQLNENREK QIALAMFECM  120
EKRRHLENLT IGDLKDMDKL IVNYMKDIKS KIHELV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAYIIDDNARKATFKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-40M-type_MADS family protein