PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW07102
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 219aa    MW: 25193.6 Da    PI: 10.1955
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW07102genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.88.9e-161150342
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
              i n+s r+ t+ kR++g+lKK  EL +LC++e++ ii+s+
  OIW07102 11 IVNDSARKATYKKRKKGLLKKVDELTTLCGIEACAIIYSP 50
              789***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTRKKVKLAY IVNDSARKAT YKKRKKGLLK KVDELTTLCG IEACAIIYSP FEPQPEVWPS  60
PWGVQKVLSK LRTMPELEQS KKMVNQETFL KQRILKAKEQ VMKLQKENRE KEITQLMFKC  120
LGSDKVQFNN LSATDLNDLA WMIDQNLKHI KRMMEKVGKN DQMNQGRTHM VAPTTLSLSG  180
RVPKNEEIAL EMMNGNGNEA MQFGETNLIM GFDLNPLLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAYIVNDSARKATYKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-53M-type_MADS family protein