PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW07115

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 430aa MW: 47517.9 Da PI: 8.0185

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07115	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	8	28	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H OIW07115 8 CEICNKGFQRDQNLQLHRRGH 28 *******************88 PP
2	zf-C2H2	11.5	0.00094	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + OIW07115 82 WKCDKCSKKYAVQSDWKAHSKIC 104 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MATNRFLCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTST EIIKRVYVCP EPSCVHHNPA 60 RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFSRR 120 DSFITHRAFC DALAEDNKGN EEQLSKMGSN LQCQPMPNLV PSLPINTNII PNPQVGGTTS 180 EFNNHSDQRH NPLSSLPNPA TSKPFNNNME MRNTCPSLHL SSNLLASHEG SSLMSATVLL 240 QKAAQMGATL SNNNSNIATT MAPLSFGSMV QLQQQQQPDS VHSFMNHYMQ QQQQDHVSSQ 300 YNNFNANHDM STGDNEGSVA GMNGVDMFNV IYDQSKALSK IIEQNNRSIN SGVLHQKNGG 360 SSSGATSIGG SKGSGDVMTL DLLGTGGGGD RNLNIYDGAQ HAETSAEDEV WRNWSNKNED 420 FESFSASSSM

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MATNRFLCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTST EIIKRVYVCP EPSCVHHNPA  60
RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFSRR  120
DSFITHRAFC DALAEDNKGN EEQLSKMGSN LQCQPMPNLV PSLPINTNII PNPQVGGTTS  180
EFNNHSDQRH NPLSSLPNPA TSKPFNNNME MRNTCPSLHL SSNLLASHEG SSLMSATVLL  240
QKAAQMGATL SNNNSNIATT MAPLSFGSMV QLQQQQQPDS VHSFMNHYMQ QQQQDHVSSQ  300
YNNFNANHDM STGDNEGSVA GMNGVDMFNV IYDQSKALSK IIEQNNRSIN SGVLHQKNGG  360
SSSGATSIGG SKGSGDVMTL DLLGTGGGGD RNLNIYDGAQ HAETSAEDEV WRNWSNKNED  420
FESFSASSSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	9e-84	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW07115