PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW07582

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 189aa MW: 20865.9 Da PI: 5.5879

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07582	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	25	47	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F ++ L H++ H OIW07582 25 FPCQFCSRKFESSQALGGHQNAH 47 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MGYEENFTKV GDSQGEDATS TLFPFPCQFC SRKFESSQAL GGHQNAHKKE RTAARNAKAS 60 EYTYVPFAST LSTPMIFAPN PQLGILDPSM FSTAHAANIP YFPPQMSELF GSNGAPRFGN 120 ALFLEGSSRS KFNEEDDNSF INWQRSIGSN NLSSGDTSQH ISLKSNNQNI GNWNDVKEEG 180 RQLDLSLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14010.1	1e-13	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW07582