PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW07741

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-X1

Protein Properties

Length: 778aa MW: 86998.6 Da PI: 8.2656

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07741	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	17.7	7.9e-06	191	209	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H+C lCH+GpCp Cp+ OIW07741 191 CG-HRCLLLCHPGPCPACPK 209 .*************96 PP
2	zf-NF-X1	20.2	1.3e-06	243	262	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H C ++CH G+CppC++ OIW07741 243 CGVHECVEICHIGDCPPCRK 262 ******************85 PP
3	zf-NF-X1	16	2.6e-05	350	369	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCpp.Cp 19 CG H+C + CH+G+C + C+ OIW07741 350 CGYHRCPERCHRGQCAEtCR 369 ****************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 778 aa Download sequence
MTSSLNNYPP QPLSDSDTDS DGGDPSSTSL RRHSDLSDSI FKSYFQFTGH SSSATASPSD 60 LSKIQSFLTS SSSGALSCLI CLERIKPSDP TWSCSSLCFS IFHLICIQSW AQQSSNLFAS 120 RASTRLPISP ETASETAIWN CPKCRVEYPK SQIPKGYFCF CGKLKDPYSD DPWVLPHSCG 180 DVCEKPLMNN CGHRCLLLCH PGPCPACPKL VKVRCFCGSN DDVRRCGFKE YSCNNQCSKL 240 LDCGVHECVE ICHIGDCPPC RKIGVYRCQC GKKNEERECF NRVYRCEEPC EKKLRCGKHV 300 CERGCHYGEC GECPLQGKRT CPCGKRVYEG LPCDVPVQVC GDTCGKMLSC GYHRCPERCH 360 RGQCAETCRT VVKKWCRCGS HRKDIWYVKG SVSRCGIVGG MLVNDVAVTG IALPAQRYVA 420 EGFDVRTINA RPHATEVDAL MILGSLATSK FDQQVPCGTE KDQKPPKCPK RCHIAPLCRH 480 ALKCKPHKCH YGACPPCRLP CDEEYPCGHA CKLRCHGAKP PPNPEFTLKP KKKKIIQNES 540 VPGTPCPSCP ELVWRSCVGQ HIGTERMERE PRCQHHCPRP CHPGDCPPCK VLIKRSCHCG 600 SMVHVFECIY YNTLSAKDQE AVRSCGGPCH RKLPNCTHLC PETCHPGQCP NPEKCCKKVT 660 VRCKCQTLKK EWLCKDVQAA YLRNDCDSSD IPKNQFGAGL IPCNSECKIK VQVAESELQL 720 RKSRVTEKII SRTKQLLLYV FILVILLVAS YYGYEGLLRL NDWMNEVDEQ RQRYSRTK

Sequence ? help Back to Top

Protein Sequence Length: 778 aa Download sequence

MTSSLNNYPP QPLSDSDTDS DGGDPSSTSL RRHSDLSDSI FKSYFQFTGH SSSATASPSD  60
LSKIQSFLTS SSSGALSCLI CLERIKPSDP TWSCSSLCFS IFHLICIQSW AQQSSNLFAS  120
RASTRLPISP ETASETAIWN CPKCRVEYPK SQIPKGYFCF CGKLKDPYSD DPWVLPHSCG  180
DVCEKPLMNN CGHRCLLLCH PGPCPACPKL VKVRCFCGSN DDVRRCGFKE YSCNNQCSKL  240
LDCGVHECVE ICHIGDCPPC RKIGVYRCQC GKKNEERECF NRVYRCEEPC EKKLRCGKHV  300
CERGCHYGEC GECPLQGKRT CPCGKRVYEG LPCDVPVQVC GDTCGKMLSC GYHRCPERCH  360
RGQCAETCRT VVKKWCRCGS HRKDIWYVKG SVSRCGIVGG MLVNDVAVTG IALPAQRYVA  420
EGFDVRTINA RPHATEVDAL MILGSLATSK FDQQVPCGTE KDQKPPKCPK RCHIAPLCRH  480
ALKCKPHKCH YGACPPCRLP CDEEYPCGHA CKLRCHGAKP PPNPEFTLKP KKKKIIQNES  540
VPGTPCPSCP ELVWRSCVGQ HIGTERMERE PRCQHHCPRP CHPGDCPPCK VLIKRSCHCG  600
SMVHVFECIY YNTLSAKDQE AVRSCGGPCH RKLPNCTHLC PETCHPGQCP NPEKCCKKVT  660
VRCKCQTLKK EWLCKDVQAA YLRNDCDSSD IPKNQFGAGL IPCNSECKIK VQVAESELQL  720
RKSRVTEKII SRTKQLLLYV FILVILLVAS YYGYEGLLRL NDWMNEVDEQ RQRYSRTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	OIW07741