PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW07793

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 515aa MW: 57419.9 Da PI: 6.8095

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07793	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.6e-07	276	297	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H OIW07793 276 FCTICGKGFKRDANLRMHMRGH 297 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MDSQRSLCTN TWARSSSSLP APGNGLQTNI SLNPPSLLDF GFQNNQNKWD DSSMSDYGVR 60 VEAAFKEFNQ SSQKGQPPFP YDSNNQIKNP DQESRLPSDS SQTFRLPDWD PCAMLNNLSF 120 LEDKIHQLQD LVRLIVSQKG QLFGHPTQHV TQEQQLVTAD LTSVIVQLIS TAGSLLPSVR 180 HTLSNSSPLV GQLNQLHEIT TPSASGSRSI QPQNNSSNKL PDQSIPSNCK MELNCNMEEH 240 ELRDEEDAED GENLPPGSYE ILQLQKEEIL APHTHFCTIC GKGFKRDANL RMHMRGHGDE 300 YKTPAALAKP HKESGSQPQL IKRYSCPYGG CKRNKEHKKF QPLKTILCVK NHYKRTHCDK 360 SYICSRCNTK KFSVMADLKT HEKHCGKDKW LCSCGTTFSR KDKLFGHIAL FQGHTPAVPF 420 DDTRVPASAP DQDCDKSNKE GSMNFSFGSN HSSGNGVQNA RDVKGSIDVP INYFSSNFET 480 NFGGFSEFTQ PPFEDSETSF SFLMPGGESS SDNLL

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MDSQRSLCTN TWARSSSSLP APGNGLQTNI SLNPPSLLDF GFQNNQNKWD DSSMSDYGVR  60
VEAAFKEFNQ SSQKGQPPFP YDSNNQIKNP DQESRLPSDS SQTFRLPDWD PCAMLNNLSF  120
LEDKIHQLQD LVRLIVSQKG QLFGHPTQHV TQEQQLVTAD LTSVIVQLIS TAGSLLPSVR  180
HTLSNSSPLV GQLNQLHEIT TPSASGSRSI QPQNNSSNKL PDQSIPSNCK MELNCNMEEH  240
ELRDEEDAED GENLPPGSYE ILQLQKEEIL APHTHFCTIC GKGFKRDANL RMHMRGHGDE  300
YKTPAALAKP HKESGSQPQL IKRYSCPYGG CKRNKEHKKF QPLKTILCVK NHYKRTHCDK  360
SYICSRCNTK KFSVMADLKT HEKHCGKDKW LCSCGTTFSR KDKLFGHIAL FQGHTPAVPF  420
DDTRVPASAP DQDCDKSNKE GSMNFSFGSN HSSGNGVQNA RDVKGSIDVP INYFSSNFET  480
NFGGFSEFTQ PPFEDSETSF SFLMPGGESS SDNLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-167	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW07793