PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW07975

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 349aa MW: 39252.1 Da PI: 7.8714

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07975	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.9	2e-06	188	207	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r nL+ H+ OIW07975 188 FSCHVCSKTFNRYNNLQMHM 207 89*****************9 PP
2	zf-C2H2	13.2	0.00027	272	294	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C +C+k F k + ++H +++ OIW07975 272 YMCRKCSKAFAVKGDWRTHEKNC 294 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MTDPRSNLFD GWFNFMPLHP SHCSYDSHDQ SSFFSSSSSY PLSYSSNNMF GIQSEASSSS 60 NIACPSSPPL REALPLINKL SLTNPHQNIE PSNGTYIAVE EDKEVESFFT GTEYDDGDGK 120 AVTMSLNIGL PKMNTSSDLR SRKVSSTSME IAAKEGVNMI SGHPFDGLNK GHYWIPTPSQ 180 ILIGPTQFSC HVCSKTFNRY NNLQMHMWGH GSQYRKGPDS LKGTQPTAML RLPCFCCAPE 240 CKHNIDHPRS KPLKDFRTLQ THYKRKHGIK PYMCRKCSKA FAVKGDWRTH EKNCGKIWYC 300 LCGSDFKHKR SLKDHIKAFG YGHGVFGMDS LQEEDEATSE IEHYGESSL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MTDPRSNLFD GWFNFMPLHP SHCSYDSHDQ SSFFSSSSSY PLSYSSNNMF GIQSEASSSS  60
NIACPSSPPL REALPLINKL SLTNPHQNIE PSNGTYIAVE EDKEVESFFT GTEYDDGDGK  120
AVTMSLNIGL PKMNTSSDLR SRKVSSTSME IAAKEGVNMI SGHPFDGLNK GHYWIPTPSQ  180
ILIGPTQFSC HVCSKTFNRY NNLQMHMWGH GSQYRKGPDS LKGTQPTAML RLPCFCCAPE  240
CKHNIDHPRS KPLKDFRTLQ THYKRKHGIK PYMCRKCSKA FAVKGDWRTH EKNCGKIWYC  300
LCGSDFKHKR SLKDHIKAFG YGHGVFGMDS LQEEDEATSE IEHYGESSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-115	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW07975