PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08038

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 686aa MW: 76164.6 Da PI: 6.9915

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08038	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.4e-05	76	97	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C++ F ++ n++rHir+H OIW08038 76 KCEKCSREFCSPINYRRHIRVH 97 8********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MPVAKVKASG TLDVMKTEDK IDNIIRQEVG IEPYLSFPRA DDSPVQWIQL LHALDQQELP 60 GWPLLSPFPV KVQLLKCEKC SREFCSPINY RRHIRVHHRL KKLAKDSTKN RDLLGAYWDK 120 LSVEEAKAVV SFNNVMLEEV PGSSILSALT ALVQRQVFSP FPHYYLRAGG ALLDIVQSNP 180 SSFPISSQEL FSILDDASEK TCLCGTAVSM QRYIFDGEAG KIGLQPKNLV ACTSFLLEQK 240 LVNAWLADKD AEALRCQKQL VEEEEAAQKR QAEILERKRQ KKLRQKEHRA KEQRHGNEVE 300 IKEDTDSTAE ALAPAEASLD TYDFEAHNPD TFVDNIPSHV PSECHDTNEG IVGDPQPGYD 360 LGTDQNIERQ SAHHNHQCTA VAKRQGSPKP QQAVGDDLQE SQNPPISKPD VILKYGTNHD 420 QRAAAIFNGS EVWRRKPKQE VDRVVLKAKV DKEPDQGKNH EVLIGSVSVT LGNCSQSEGN 480 AVTSREDGVV KNLAKQNCFQ DKPMKPDFDQ SGNNQLTTVF WRPVSRHEIK DSLAVNRGGP 540 EADAVYGNDD CHNLSGLSSL RLCSVEGRSD IGSENNSLHL EGTVELGKSR LSSHAARAFL 600 SQRWKEAISS DHVKLVIYPN SEPPGCKKTQ DSEVTTGQHS DVDKSNIHAS AQNQLPATTG 660 VTKIKPKTKP EKGTKAKYIP KQKTTT

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MPVAKVKASG TLDVMKTEDK IDNIIRQEVG IEPYLSFPRA DDSPVQWIQL LHALDQQELP  60
GWPLLSPFPV KVQLLKCEKC SREFCSPINY RRHIRVHHRL KKLAKDSTKN RDLLGAYWDK  120
LSVEEAKAVV SFNNVMLEEV PGSSILSALT ALVQRQVFSP FPHYYLRAGG ALLDIVQSNP  180
SSFPISSQEL FSILDDASEK TCLCGTAVSM QRYIFDGEAG KIGLQPKNLV ACTSFLLEQK  240
LVNAWLADKD AEALRCQKQL VEEEEAAQKR QAEILERKRQ KKLRQKEHRA KEQRHGNEVE  300
IKEDTDSTAE ALAPAEASLD TYDFEAHNPD TFVDNIPSHV PSECHDTNEG IVGDPQPGYD  360
LGTDQNIERQ SAHHNHQCTA VAKRQGSPKP QQAVGDDLQE SQNPPISKPD VILKYGTNHD  420
QRAAAIFNGS EVWRRKPKQE VDRVVLKAKV DKEPDQGKNH EVLIGSVSVT LGNCSQSEGN  480
AVTSREDGVV KNLAKQNCFQ DKPMKPDFDQ SGNNQLTTVF WRPVSRHEIK DSLAVNRGGP  540
EADAVYGNDD CHNLSGLSSL RLCSVEGRSD IGSENNSLHL EGTVELGKSR LSSHAARAFL  600
SQRWKEAISS DHVKLVIYPN SEPPGCKKTQ DSEVTTGQHS DVDKSNIHAS AQNQLPATTG  660
VTKIKPKTKP EKGTKAKYIP KQKTTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	283	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-130	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW08038