PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08083

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 363aa MW: 41709.7 Da PI: 8.5616

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08083	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.9e-17	168	212	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed +l+++v+ +G+g W++Ia+ m gR +kqc++rw+++l OIW08083 168 QWTEDEDRILIQLVNCFGPGKWSLIAELMK-GRVGKQCRDRWNNHL 212 7**************************9.***********97 PP
2	Myb_DNA-binding	58	2.2e-18	218	260	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eEd++l++a+k+ G++ W+ Ia++m+ gRt++ +k++w+ OIW08083 218 KDSWTNEEDKILIEAHKEVGNK-WTEIAKRMP-GRTENTVKNHWN 260 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MEFDPNSANK FPHLSGNFPE NPNIKSEVPI ILPPQQTSIL EPSSPNNTFY NKNNFHHFQH 60 YYDLLNGTNH HHGFLMMGPS SSITNYFSMF SNPSSGESLR NIVKIQDMHG HLNNENYLLD 120 FSKTNPIHQC GVSSQPHVGL SLYPPVIYAS TKGNYDTEIV HRITTKAQWT EDEDRILIQL 180 VNCFGPGKWS LIAELMKGRV GKQCRDRWNN HLRPNIKKDS WTNEEDKILI EAHKEVGNKW 240 TEIAKRMPGR TENTVKNHWN ATKRRKTAKK QSHMSTYSNG TLLHNYIMQV TKGGAEKELN 300 KTMSNITLEN KNCNDVGVPS KGEFTSMDSR TMVYGQHQNY EVGWNLQHNM YTINRNGVND 360 DDY

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MEFDPNSANK FPHLSGNFPE NPNIKSEVPI ILPPQQTSIL EPSSPNNTFY NKNNFHHFQH  60
YYDLLNGTNH HHGFLMMGPS SSITNYFSMF SNPSSGESLR NIVKIQDMHG HLNNENYLLD  120
FSKTNPIHQC GVSSQPHVGL SLYPPVIYAS TKGNYDTEIV HRITTKAQWT EDEDRILIQL  180
VNCFGPGKWS LIAELMKGRV GKQCRDRWNN HLRPNIKKDS WTNEEDKILI EAHKEVGNKW  240
TEIAKRMPGR TENTVKNHWN ATKRRKTAKK QSHMSTYSNG TLLHNYIMQV TKGGAEKELN  300
KTMSNITLEN KNCNDVGVPS KGEFTSMDSR TMVYGQHQNY EVGWNLQHNM YTINRNGVND  360
DDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	5e-54	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW08083