PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08225

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 402aa MW: 43998.2 Da PI: 6.6189

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08225	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119	5.9e-37	24	167	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................................sss 68 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++ + + OIW08225 24 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDKLAELpawnpttttnyeqingilhrqppaaedgiigcggGRI 124 79**************************************************************7777766666666666666444444433333333111 PP TCP 69 saseceaesssssasnsssg...........................k 89 s+ e+++++++++++ + OIW08225 125 SE-EFQQQQQQQEED----FaeennnsnrynsvgsgflplsmdtdivD 167 11.111111111111....01111222344444555555555555541 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MRNTTRTRVG EIVEVEGGHI VRSTGRKDRH SKVCTAKGPR DRRVRLSAHT AIQFYDVQDR 60 LGYDRPSKAV DWLINKAKSA IDKLAELPAW NPTTTTNYEQ INGILHRQPP AAEDGIIGCG 120 GGRISEEFQQ QQQQQEEDFA EENNNSNRYN SVGSGFLPLS MDTDIVDTIK SFFPMVAAAE 180 TTASFHNIST PSSAAANHNH QEDLRLSLQS FQDPILLHHQ QQQQIQQMLF TGTNTLGFDG 240 GGSSGWLEQH HGEEQEQVHD HGRFHRMVAW NSAVTDAGNN GHGGGFVFNS SPPSFVAPAS 300 MFGHHGQHFS QRGPLQSNNT PSIRAWIDPN SFAAAATVAA ASHPHYQYLS PAMHQASVYG 360 GIGFASPSGG FSGFHIPARI QGEEERDGIS DKPSSASSDS RH

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MRNTTRTRVG EIVEVEGGHI VRSTGRKDRH SKVCTAKGPR DRRVRLSAHT AIQFYDVQDR  60
LGYDRPSKAV DWLINKAKSA IDKLAELPAW NPTTTTNYEQ INGILHRQPP AAEDGIIGCG  120
GGRISEEFQQ QQQQQEEDFA EENNNSNRYN SVGSGFLPLS MDTDIVDTIK SFFPMVAAAE  180
TTASFHNIST PSSAAANHNH QEDLRLSLQS FQDPILLHHQ QQQQIQQMLF TGTNTLGFDG  240
GGSSGWLEQH HGEEQEQVHD HGRFHRMVAW NSAVTDAGNN GHGGGFVFNS SPPSFVAPAS  300
MFGHHGQHFS QRGPLQSNNT PSIRAWIDPN SFAAAATVAA ASHPHYQYLS PAMHQASVYG  360
GIGFASPSGG FSGFHIPARI QGEEERDGIS DKPSSASSDS RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-75	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW08225