PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08343

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 453aa MW: 49855.8 Da PI: 8.4462

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08343	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9e-05	43	63	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F r nL+ H r H OIW08343 43 CETCGKGFQRDQNLQLHRRGH 63 *******************88 PP
2	zf-C2H2	12.9	0.00033	117	139	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ OIW08343 117 WKCDKCSKRYAVQSDWKAHSKTC 139 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MMLEKMDDGE VSNGFPKNPT TDPEAEIIAL SPKTLMATNR FLCETCGKGF QRDQNLQLHR 60 RGHNLPWKLK QRTSKEIRKR VYVCPEKTCV HHNPARALGD LTGIKKHFCR KHGEKKWKCD 120 KCSKRYAVQS DWKAHSKTCG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ETARVNATSN 180 ISNSLGPNFS YNIMGTTQGF NMATHFSSIF EPVSNTGHET SSQTSRGLSL WMDELSHQAH 240 ETMVNENIHQ LGSVTSSGSA IYDGNNNPLV QYSNNPLLSN NYRPNWILGT KPSSNSSQEL 300 ITSTTSSLPL VNVIKDATCT NQLISVPSLY SSQHQSHQTS SAANMSATAL LQKAAQIGAT 360 STHDPSFLGS LGLKCSDSQV QDGNRFCLMY GSSSVLTSSG TDAHNSACDL SQMHPAKRRH 420 VQIEDGPGGG QTRDFLGVGM QTICHPSSIN GWI

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MMLEKMDDGE VSNGFPKNPT TDPEAEIIAL SPKTLMATNR FLCETCGKGF QRDQNLQLHR  60
RGHNLPWKLK QRTSKEIRKR VYVCPEKTCV HHNPARALGD LTGIKKHFCR KHGEKKWKCD  120
KCSKRYAVQS DWKAHSKTCG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ETARVNATSN  180
ISNSLGPNFS YNIMGTTQGF NMATHFSSIF EPVSNTGHET SSQTSRGLSL WMDELSHQAH  240
ETMVNENIHQ LGSVTSSGSA IYDGNNNPLV QYSNNPLLSN NYRPNWILGT KPSSNSSQEL  300
ITSTTSSLPL VNVIKDATCT NQLISVPSLY SSQHQSHQTS SAANMSATAL LQKAAQIGAT  360
STHDPSFLGS LGLKCSDSQV QDGNRFCLMY GSSSVLTSSG TDAHNSACDL SQMHPAKRRH  420
VQIEDGPGGG QTRDFLGVGM QTICHPSSIN GWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-143	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW08343