PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08404

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 245aa MW: 28008.3 Da PI: 6.9408

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08404	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.4	4.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ ++ + R++k+c++rw +yl OIW08404 14 KGTWTPEEDRKLLAYVTKYGHWNWRQLPKFADLARCGKSCRLRWKNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	55	1.9e-17	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ T+eE+e +v++++++G++ W++Ia++++ gR+++ +k++w+ OIW08404 67 RGNYTQEEEETIVKLHAKFGNR-WSKIASHLP-GRSDNGIKNHWH 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MVRTPYSDKN GIKKGTWTPE EDRKLLAYVT KYGHWNWRQL PKFADLARCG KSCRLRWKNY 60 LKPGIKRGNY TQEEEETIVK LHAKFGNRWS KIASHLPGRS DNGIKNHWHA CLKKHFQHNS 120 VRNEKAVEPT QEKDVSLEIN DPFHNNSPST PQTRDASPSS QQTSVSDILC STAESASDGN 180 YLNMVQDVDQ VANFLDIDMG LLSGDFYTTE FDVADFSYIP GELYARFVSE PECLSPVYDA 240 QLWGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	2e-53	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW08404