PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08502

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 321aa MW: 37118 Da PI: 7.8812

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08502	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	158	177	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ OIW08502 158 FACNICSKTFNRYNNMQMHM 177 78*****************9 PP
2	zf-C2H2	12.4	0.00047	242	264	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C k+F k + ++H +++ OIW08502 242 FTCRKCAKTFAVKGDWRTHEKNC 264 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MDLRECNNIV EDKKLYLHSP TFIEWLKPSN SSPSYQTPTV SSSISSPFSM TQNELDHETI 60 QFLPILSGKP SQEDLKMEGF EVNEEKVEQM TVTLHIGLPH SNSTTDHEYP DEKKKVFHVK 120 EEEEEEEDTL IKTNFHGSSE RRFWIPSPAH ILVGPMQFAC NICSKTFNRY NNMQMHMWGH 180 GSEYRKGLNS LRGTQPAEML RLPCYCCAQG CKNNINHPRA KPLKDFRTLQ THYKRKHGTK 240 PFTCRKCAKT FAVKGDWRTH EKNCGKLWYC TCGSDFKHKR SLKDHIISFG KGHNPRPNSL 300 KEFDCITGSD EDHEVVHNTI I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-111	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW08502