PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08534

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 362aa MW: 40735 Da PI: 7.2324

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08534	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.4	6.4e-07	208	229	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C Cgk F+r nL+ H+r H OIW08534 208 FCDVCGKGFKRDANLRMHMRAH 229 6*******************99 PP
2	zf-C2H2	12.5	0.00046	296	319	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+Lk+H + + OIW08534 296 YVCKMCNlKQFSVLSDLKTHEKHC 319 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MMPTPTSGDF SNAPEGLPHV TGYLVSPSSG YGSSYSSSLL FYLTVLKEKF NELQNLVGVN 60 CPLQHTLHNL PNSMAVSNMN STIQEIILAA NSMMVSLGST TPGTNTTTFT DQQLHQQHQS 120 NSDNNYRSVL SSSNICHDNI REHSFFSNIE ADELDWFAES YDDKNNSNST SNITYNDNDG 180 CIGELLSRDE TDIIEFDAAD LLASYTHFCD VCGKGFKRDA NLRMHMRAHG DEYKTTEALS 240 NPMKNKGIMS MKSIKKKYSC PQEGCRWNKK HAKFQPLKSM ICVKNHYKRT HCPKIYVCKM 300 CNLKQFSVLS DLKTHEKHCG DPKWECLCGN TFSRKDKLMG HVALFVGLSS YTGKLEHECI 360 LH

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MMPTPTSGDF SNAPEGLPHV TGYLVSPSSG YGSSYSSSLL FYLTVLKEKF NELQNLVGVN  60
CPLQHTLHNL PNSMAVSNMN STIQEIILAA NSMMVSLGST TPGTNTTTFT DQQLHQQHQS  120
NSDNNYRSVL SSSNICHDNI REHSFFSNIE ADELDWFAES YDDKNNSNST SNITYNDNDG  180
CIGELLSRDE TDIIEFDAAD LLASYTHFCD VCGKGFKRDA NLRMHMRAHG DEYKTTEALS  240
NPMKNKGIMS MKSIKKKYSC PQEGCRWNKK HAKFQPLKSM ICVKNHYKRT HCPKIYVCKM  300
CNLKQFSVLS DLKTHEKHCG DPKWECLCGN TFSRKDKLMG HVALFVGLSS YTGKLEHECI  360
LH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-86	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW08534