PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08536

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 297aa MW: 32657.4 Da PI: 7.4213

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08536	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	122	144	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+++F++ L H +H OIW08536 122 YECRTCNRTFPSFQALGGHRASH 144 99**********99999998887 PP
2	zf-C2H2	12	0.00066	210	232	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H OIW08536 210 HECSICGAEFASGQALGGHMRRH 232 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MEKDQVLGSE EELVIMAKGK RTKRLRLLSP NFGGSGATAT CTYTSANNSE DSSSTTTYES 60 NDEEDQDMAN CLILLARGGG VGDSHHHQKQ QDHHDGDGNN KIEKGSNSNG TLKFAEMATA 120 IYECRTCNRT FPSFQALGGH RASHKKLKLM MSEEKRLSTP QSEPQPHVVS KFDHFEGGGK 180 PHIKTSPSIS FKLESQANRS IFNANKAKIH ECSICGAEFA SGQALGGHMR RHRATTNTAT 240 QVLAAAKEEI QHRRNMLELD LNLPAPEEDL RESKYQFPAV QKSMVLSASP ALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	8e-56	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW08536