PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08678

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

DBB

Protein Properties

Length: 237aa MW: 26070.4 Da PI: 4.7182

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08678	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.8	1.9e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ OIW08678 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnrlaskHQR 44 7*****************************55667777765 PP
2	zf-B_box	28.2	3.9e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + ++C+ +++k + +fC +++ l+C+dC + +H+ H OIW08678 53 KLPRCDICQDKAAFIFCVEDRALFCKDCDEPIHSAgslssnH 94 789******************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANRLAS KHQRLLLQCL PNKLPRCDIC 60 QDKAAFIFCV EDRALFCKDC DEPIHSAGSL SSNHQRFLAT GIRVALSSNC PKGDEKSHSE 120 PSNPSVQPAH VKTPQQVPSF TSSWAVDDIL ELTDFESPGK KGSLEFGELE WLADEDLFSE 180 QFPQEALAAA EVPQIPVMHT SSVTSYKASK SYMSYKKPRI EVLDEDDNEH CTVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	5e-88	DBB family protein

Link Out ? help Back to Top
Ensembl	OIW08678