PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08899

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 347aa MW: 40860.9 Da PI: 4.5888

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08899	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.6	4.2e-15	116	200	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++ + +L+e+ ++ +l+r++l++ +W +v++k+ +e ++er+ qC++ +++l+ rykk+k + ++ + s s+++yf++++ OIW08899 116 WTEHATFVLLEVWGDKFLQLGRNSLRMEDWNDVAEKVsEELKVERNVFQCRNMLDKLKSRYKKEKGRINEM-CLSISKWAYFKKMD 200 ***********************************8889********************999985.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MDDMEDDARY PPNSFSLNRQ NPSHRQNLYH HHRPIPTRYV EESDDDEGHD EFDNYDAEED 60 EFEEGQNGYG GNFENDNGFG RNPSKKRKVR VGSSVSNYEL APRLKMSYNR SSADDWTEHA 120 TFVLLEVWGD KFLQLGRNSL RMEDWNDVAE KVSEELKVER NVFQCRNMLD KLKSRYKKEK 180 GRINEMCLSI SKWAYFKKMD MLMASSSRQE YGLACGVDSG EYVFMNTRVY LNKSNGFDEM 240 RDSPSESETD EDNDDSKTRI CGRDDDDDDE TSYRVLSDSI QKFGKIYEKI ENSKRKQMME 300 LEKMRLDFNR ELELQNKQIL ERAQTEIAKI RDVHEVERET SAENLSE

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MDDMEDDARY PPNSFSLNRQ NPSHRQNLYH HHRPIPTRYV EESDDDEGHD EFDNYDAEED  60
EFEEGQNGYG GNFENDNGFG RNPSKKRKVR VGSSVSNYEL APRLKMSYNR SSADDWTEHA  120
TFVLLEVWGD KFLQLGRNSL RMEDWNDVAE KVSEELKVER NVFQCRNMLD KLKSRYKKEK  180
GRINEMCLSI SKWAYFKKMD MLMASSSRQE YGLACGVDSG EYVFMNTRVY LNKSNGFDEM  240
RDSPSESETD EDNDDSKTRI CGRDDDDDDE TSYRVLSDSI QKFGKIYEKI ENSKRKQMME  300
LEKMRLDFNR ELELQNKQIL ERAQTEIAKI RDVHEVERET SAENLSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	8e-88	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW08899