PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08950

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 298aa MW: 33718 Da PI: 8.2306

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08950	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.6e-05	135	154	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ OIW08950 135 FSCPLCFKTFNRYNNMQMHM 154 89*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MISFTHHHHK SCHHDPSSPP PREALPLLNL SPRKGEDLET SFSSMEVENN NKESIISLDH 60 EDASVTVALH LGLPSTTSTT SVDLASNILS TTEISSEKDN EKVTVASTEY PSSRINRGQY 120 WIPTPSQILI GPTQFSCPLC FKTFNRYNNM QMHMWGHGSQ YRKGPESLRG TQPTAMLRLP 180 CFCCAPGCKN NIDHPRAKPL KDFRTLQTHY KRKHGIKPFM CRKCCKAFAV RGDWRTHEKN 240 CGKLWYCSCG SDFKHKRSLK DHIKAFGNGH KAYGIDCLDQ DDEGGSEIEH ESESFHRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-127	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW08950