PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09092

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 406aa MW: 46490 Da PI: 4.305

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09092	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.6	8.8e-15	176	260	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L+++ ++ + +r++l+ W+ev++k+ + +er+ +qC+++++ l+k+ykk+k + ++ +s+++yf++++ OIW09092 176 WTEHETFVLLDVWGDRFLQHGRKSLRSEEWQEVAEKVsKVSRVERTDTQCRNRLDTLKKKYKKEKIKFPEM-DGGTSNWVYFKRMD 260 ***********************************556778******************999986.78888******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MDGIEDDDTR YPSNPYRVSH HQQGFGYMSH RKLPTNVYPY SQPVENEYGE NNNISESEEE 60 EEQLGEEGDD DDDVNNIHPS EKDADDNEDQ EEDDADANGG GDENCDDNGD GEDDDDDDDD 120 KGKSYIMEID DDLERQPKKQ KLKSLISAYE FAPRVPAPSA AAPKPSSGGR NPLTDWTEHE 180 TFVLLDVWGD RFLQHGRKSL RSEEWQEVAE KVSKVSRVER TDTQCRNRLD TLKKKYKKEK 240 IKFPEMDGGT SNWVYFKRMD KLMSSPPQQA GISCGLDSGE YVSTNSRIYS NRANGLDETR 300 DSPENTESTK EGSDGPHAKK RRKGRSSSES SSFRLLADSL HKFSNIYEKI ENDRRQQMVE 360 LEKMRMDFQM EIETQRRQVL ERLQSEISKL DQTEDDENDG SSENGM

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MDGIEDDDTR YPSNPYRVSH HQQGFGYMSH RKLPTNVYPY SQPVENEYGE NNNISESEEE  60
EEQLGEEGDD DDDVNNIHPS EKDADDNEDQ EEDDADANGG GDENCDDNGD GEDDDDDDDD  120
KGKSYIMEID DDLERQPKKQ KLKSLISAYE FAPRVPAPSA AAPKPSSGGR NPLTDWTEHE  180
TFVLLDVWGD RFLQHGRKSL RSEEWQEVAE KVSKVSRVER TDTQCRNRLD TLKKKYKKEK  240
IKFPEMDGGT SNWVYFKRMD KLMSSPPQQA GISCGLDSGE YVSTNSRIYS NRANGLDETR  300
DSPENTESTK EGSDGPHAKK RRKGRSSSES SSFRLLADSL HKFSNIYEKI ENDRRQQMVE  360
LEKMRMDFQM EIETQRRQVL ERLQSEISKL DQTEDDENDG SSENGM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	318	324	AKKRRKG
2	319	323	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-61	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW09092