PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09117

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 257aa MW: 28000.5 Da PI: 7.1982

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09117	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	97	119	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs+ L H +H OIW09117 97 YECKTCNKTFSSFQALGGHRASH 119 99**********99999998887 PP
2	zf-C2H2	14.7	9e-05	182	204	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++Cg F++ L H+r+H OIW09117 182 HKCSICGAKFTSGQALGGHMRKH 204 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MNMDRSIGTS ANSSCHGGDH CSFSSPTTPF ESVGKEEEDM ANCLILLAQG KRGENDRGSG 60 GSNERITCTT TIAETTNITT TIVTAVKTTT KNSLYDYECK TCNKTFSSFQ ALGGHRASHK 120 KPIMNLEEKK SLLLSLSLSP QISFEFEERK QFDVENSSEI PISIQLGCGK NNFFHGNKSK 180 IHKCSICGAK FTSGQALGGH MRKHRIYKNP STHVVNMSGS DTSFEASATD TTIEVNPCNV 240 LKIDLNLPAL EEDLMKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	1e-34	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW09117