PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09140

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 1321aa MW: 146582 Da PI: 6.4459

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09140	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.5	9.9e-18	571	629	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+++ ++++ps +r++L + + +++ +q+kvWFqNrR +ek+ OIW09140 571 KYVRYTAEQVEALERVYMECPKPSSLRRQQLIRDCpilsNIEPKQIKVWFQNRRCREKQ 629 56789****************************************************97 PP
2	START	156.6	2e-49	710	917	2	204
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXTT CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelqa 100 +aee+++e+++ka+ ++ Wv+++ +++g+e++ +f+ s+++ g a+ra+g+v +++ v+e+l+d++ W + +++ e+ ++ g g+++l +++++a OIW09140 710 IAEETLTEFLSKATGTAVDWVQMPGMKPGPESVGIFAISQGCIGVAARACGLVSLEPT-KVAEILKDRLSWFRECRSLEVFTTVPAGngGTIELVYTQTYA 809 789*****************************************************.8999999999************9999******** PP XX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHH CS START 101 lsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwv 197 +++l+p Rdf+++Ry+ +l+ g++v++++S++ p +++vRae+l Sg+li+p+++g+s +++v+h +l+ ++++++l++l++s+ + ++k++ OIW09140 810 PTTLAPaRDFWTLRYTTTLENGSLVVCERSLSGSGAGPDaaaAAQFVRAEVLSSGYLIRPCEGGGSIIHIVDHLNLQPWSVPEVLQPLYESSKVVAQKMTI 910 ****************************99999988999****************************************************** PP HHTXXXX CS START 198 atlqrqc 204 a+l++ + OIW09140 911 AALRYIR 917 99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 1321 aa Download sequence
MSSESHSDQF HLPTLTSSLF DPEEDSSIHD PNGVVHGSSS AHSQPSDDVS IRAHTASSQP 60 STPSSSGYVA EIEDVALQNE IQELSIHGDD QYHNALAYSN HDELIGKPHR SDEDDASISW 120 RKRKKHFFVL SHSGKPIYSR YGDEHKLAGF SATLQAIISF VENGDFSKGQ TFFHPVFRGD 180 RVKLVRAGKH QVVFLVKGPI YLVCISCTEE PYESLVEQLE LIYGQMIVIL TKAVNKCFEK 240 NPKFDMTPLL GGTDIVFSSL IHSFSWNPAT FLHAYTCLPL AYATRQAADA ILQDVADSGV 300 LFAILMCRHK VISLVGAQKA TLHPDDMLLL ANFVMSSESF RQADTYLMLL TTSSDAFYHL 360 KDCRIHIEMV LLKSNVLSEV QRSLLDGGMR VEDLPPLPRF GSSQLGQNRL QLDSPDRLRE 420 PNSGIGGDAG LWHFLYRSIY LDQYVSSEFS SPINTPQQQK RLYRAYQKFF VSMHDKGIGP 480 HKTQFRRDEN YVLLCWVTQD FELYAAFDPL ADKHYPLSEK SYKYKNLLIV LFVKCVIVRL 540 VLKNMAMSGT QHRESNSSGG SSIDKHLDSG KYVRYTAEQV EALERVYMEC PKPSSLRRQQ 600 LIRDCPILSN IEPKQIKVWF QNRRCREKQR KEASRLHTVN RKLSAMNKLL MEENNRLQKQ 660 VSLLVCENGY MRQQLRIPSA RAADASCDSA VTTPQHYMRD ANTPAGFLSI AEETLTEFLS 720 KATGTAVDWV QMPGMKPGPE SVGIFAISQG CIGVAARACG LVSLEPTKVA EILKDRLSWF 780 RECRSLEVFT TVPAGNGGTI ELVYTQTYAP TTLAPARDFW TLRYTTTLEN GSLVVCERSL 840 SGSGAGPDAA AAAQFVRAEV LSSGYLIRPC EGGGSIIHIV DHLNLQPWSV PEVLQPLYES 900 SKVVAQKMTI AALRYIRQIA QETSGEVVYG LGRQPAVLRT FSQRLSRGFN HAVNGFNDDG 960 WSVVNCDGAE DIIISVNSTK NLSGTSNLAT PLTSLGGILC AKASMLLQNV PPAALIRFLR 1020 EHRSEWADFN IDAYSAASLK SGSYTYPGTR PTSFTGNQII MPLGHTIEHE EMLEVVRLEG 1080 HSLAQEDAFV SRDIHLLQIC SGIDENSVGP CSELIFAPID EMFPDDAPLV PSGFRIIPLD 1140 SKPGDKKDAT TGNRTLDLTS GLEVGLATSH AAGDASSCYT NRSVLTIAFQ FPFDSSLQDN 1200 VAGMALQYVR SVISSVQRVA MAISPSGIDP AAGLDMMETT LVALQDITLD KIFDESGRKA 1260 LFSDFAKIMQ QCKFLLHNNI SNVVAYDNDS ASKLNSFFYM YRCINLLLNF QVYNLTFPFD 1320 L

Sequence ? help Back to Top

Protein Sequence Length: 1321 aa Download sequence

MSSESHSDQF HLPTLTSSLF DPEEDSSIHD PNGVVHGSSS AHSQPSDDVS IRAHTASSQP  60
STPSSSGYVA EIEDVALQNE IQELSIHGDD QYHNALAYSN HDELIGKPHR SDEDDASISW  120
RKRKKHFFVL SHSGKPIYSR YGDEHKLAGF SATLQAIISF VENGDFSKGQ TFFHPVFRGD  180
RVKLVRAGKH QVVFLVKGPI YLVCISCTEE PYESLVEQLE LIYGQMIVIL TKAVNKCFEK  240
NPKFDMTPLL GGTDIVFSSL IHSFSWNPAT FLHAYTCLPL AYATRQAADA ILQDVADSGV  300
LFAILMCRHK VISLVGAQKA TLHPDDMLLL ANFVMSSESF RQADTYLMLL TTSSDAFYHL  360
KDCRIHIEMV LLKSNVLSEV QRSLLDGGMR VEDLPPLPRF GSSQLGQNRL QLDSPDRLRE  420
PNSGIGGDAG LWHFLYRSIY LDQYVSSEFS SPINTPQQQK RLYRAYQKFF VSMHDKGIGP  480
HKTQFRRDEN YVLLCWVTQD FELYAAFDPL ADKHYPLSEK SYKYKNLLIV LFVKCVIVRL  540
VLKNMAMSGT QHRESNSSGG SSIDKHLDSG KYVRYTAEQV EALERVYMEC PKPSSLRRQQ  600
LIRDCPILSN IEPKQIKVWF QNRRCREKQR KEASRLHTVN RKLSAMNKLL MEENNRLQKQ  660
VSLLVCENGY MRQQLRIPSA RAADASCDSA VTTPQHYMRD ANTPAGFLSI AEETLTEFLS  720
KATGTAVDWV QMPGMKPGPE SVGIFAISQG CIGVAARACG LVSLEPTKVA EILKDRLSWF  780
RECRSLEVFT TVPAGNGGTI ELVYTQTYAP TTLAPARDFW TLRYTTTLEN GSLVVCERSL  840
SGSGAGPDAA AAAQFVRAEV LSSGYLIRPC EGGGSIIHIV DHLNLQPWSV PEVLQPLYES  900
SKVVAQKMTI AALRYIRQIA QETSGEVVYG LGRQPAVLRT FSQRLSRGFN HAVNGFNDDG  960
WSVVNCDGAE DIIISVNSTK NLSGTSNLAT PLTSLGGILC AKASMLLQNV PPAALIRFLR  1020
EHRSEWADFN IDAYSAASLK SGSYTYPGTR PTSFTGNQII MPLGHTIEHE EMLEVVRLEG  1080
HSLAQEDAFV SRDIHLLQIC SGIDENSVGP CSELIFAPID EMFPDDAPLV PSGFRIIPLD  1140
SKPGDKKDAT TGNRTLDLTS GLEVGLATSH AAGDASSCYT NRSVLTIAFQ FPFDSSLQDN  1200
VAGMALQYVR SVISSVQRVA MAISPSGIDP AAGLDMMETT LVALQDITLD KIFDESGRKA  1260
LFSDFAKIMQ QCKFLLHNNI SNVVAYDNDS ASKLNSFFYM YRCINLLLNF QVYNLTFPFD  1320
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	125	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60690.1	0.0	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW09140