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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW09354 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | NAC | ||||||||
| Protein Properties | Length: 246aa MW: 27868.9 Da PI: 5.683 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 160.4 | 7e-50 | 18 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
+ pGfrF Ptdeel+++yL+kk++g++ ++ +vi+ev+++++ePwdLp k++ ++++ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s +++++
OIW09354 18 MFPGFRFCPTDEELISYYLRKKLDGHEDSV-QVISEVELCNFEPWDLPaKSFIQSDNEWFFFSPRGRKYPNGTQSKRATEYGYWKATGKERNVKS-GSNVI 116
579************************999.99***************667777899**************************************.99*** PP
NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
g+k+tLvf+ grapkge+t+W+mhey +
OIW09354 117 GTKRTLVFHLGRAPKGERTEWIMHEYCI 144
**************************86 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 246 aa Download sequence |
MIEGVSREAQ MSLAASSMFP GFRFCPTDEE LISYYLRKKL DGHEDSVQVI SEVELCNFEP 60 WDLPAKSFIQ SDNEWFFFSP RGRKYPNGTQ SKRATEYGYW KATGKERNVK SGSNVIGTKR 120 TLVFHLGRAP KGERTEWIMH EYCISDKSQE SLVVCRLKRN TEFRSSDAQN RASSSQMHIV 180 NSHESDGVDQ RDGVCQEDKE GSSYGSLSTE QIDSVSESNQ RLANETALTE SSGHAKVDLC 240 ITYPQF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G27300.1 | 3e-90 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW09354 |




