 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OIW09800 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
| Family | YABBY | ||||||||
| Protein Properties | Length: 216aa MW: 24162.6 Da PI: 7.5776 | ||||||||
| Description | YABBY family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | YABBY | 231.4 | 2.2e-71 | 11 | 178 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102
d+ s seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++ + + hl+ s+ + ++ l+ + +++++++++ s+ +
OIW09800 11 DHLSHSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHLGYSFISPSHNLLEEIPNPSPNLFINQNANMAHDFSMP-P 110
67899**********************************************99999999********99998888888888888888888887777644.8 PP
YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
+ +e+pr+p ++rPPekrqrvPsaynrfik+eiqrika nPdi+hreafsaaaknWahfP+ihfgl
OIW09800 111 RTAIDELPRPPITNRPPEKRQRVPSAYNRFIKDEIQRIKAVNPDITHREAFSAAAKNWAHFPHIHFGL 178
99999****999******************************************************97 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 216 aa Download sequence |
MSSSSSTLSL DHLSHSEQLC YVHCNICDTV LAVSVPCTSL FKTVTVRCGH CTNLLPVNMR 60 GLLLPSPNQF HLGYSFISPS HNLLEEIPNP SPNLFINQNA NMAHDFSMPP RTAIDELPRP 120 PITNRPPEKR QRVPSAYNRF IKDEIQRIKA VNPDITHREA FSAAAKNWAH FPHIHFGLMP 180 TEQTVMKKTN VCQQEGEEVL IKDGFYGSAN VGVSPY |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G45190.1 | 1e-77 | YABBY family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIW09800 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|