PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09839

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 209aa MW: 24334 Da PI: 8.9918

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09839	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.7	8.5e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCdaeva+++fs++gklye+ss OIW09839 9 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDAEVALMVFSTRGKLYEFSS 59 79***********************************************96 PP
2	K-box	63	1.2e-21	97	171	24	98
K-box 24 LkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + k+ie L+ ++R llGe+L+++ +++LqqLe+qLe+sl+kiR+kK++l++e+ie+l++ ek l +en++L+++ OIW09839 97 MAKKIEHLEVSKRMLLGEGLGTCCINDLQQLEKQLERSLNKIRAKKSQLFKEKIEKLREEEKCLLDENRRLQEQC 171 6799********************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MVRGKTQMKR IENETSRQVT FSKRRNGLLK KAFELSVLCD AEVALMVFST RGKLYEFSSS 60 SINKTVERYQ KKVKDLSHNT NGIQENTQHV MEGDISMAKK IEHLEVSKRM LLGEGLGTCC 120 INDLQQLEKQ LERSLNKIRA KKSQLFKEKI EKLREEEKCL LDENRRLQEQ CKIEKQQSLS 180 KQDLELVGEI RSEEEVETEL FIGPPERRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11880.1	1e-69	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIW09839