PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09872

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 618aa MW: 69540.7 Da PI: 5.8091

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09872	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46	9.7e-15	420	466	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ErrRR+++N++f +Lr+++P+ K +K++iL A++Y+++L+ OIW09872 420 NHVLSERRRRAKLNERFLTLRSMVPST-----SKDDKVSILDDAIDYLRKLE 466 78999*******************7.....6**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MEMVPENMKK QLSLVVRSIQ WIYAIFWSGS ATKPGVLSWG EGYYNGDIKT RKANQGVELN 60 SDEIGLQRSE QLRELFRSFK TTEATKKPSA TLSPEDLTDT EWYYLVCMSF VFNNGEGLPG 120 RTLENDRPIW LCNAHSTDCI LFGRSLLAKT VVCFPFMDGV IELGTTDLVQ EDLSLIQRIR 180 TSFLNILEFN APKRDGATLN MINEEEVADK NAYNAKSTAE VGNEIINITS PNTSDALQGN 240 QPADETLIVE MVNGGNPRVQ SWQVSDDELS NCIHNAMNSS DCISQTFASP EKIASVANGE 300 NCNDHCAINL QKFNNPEMTL VDPQRDDWHY QSVLSTLLKS SDQLTMGTHF QNFHQVSSFV 360 SWKKAGPTDC QRPRARNSKS LLKKVLFEVP RMHLEGLLES QEENDYKEGM RPEVDGNGMN 420 HVLSERRRRA KLNERFLTLR SMVPSTSKDD KVSILDDAID YLRKLEKRLR ELEAQREIID 480 IETRTKRSPQ DMVERTSDNY FNKTDNGKKP VVKKRKVCDI DAARVEINAD ALNGSSTNDV 540 TVTVSGKEVV IELKCPSTEG RVLKIMEAIS SLNLDFNSVQ STESDGTLYM TIKSKLKGPT 600 IVSAKKIKQT LQRVASKC

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MEMVPENMKK QLSLVVRSIQ WIYAIFWSGS ATKPGVLSWG EGYYNGDIKT RKANQGVELN  60
SDEIGLQRSE QLRELFRSFK TTEATKKPSA TLSPEDLTDT EWYYLVCMSF VFNNGEGLPG  120
RTLENDRPIW LCNAHSTDCI LFGRSLLAKT VVCFPFMDGV IELGTTDLVQ EDLSLIQRIR  180
TSFLNILEFN APKRDGATLN MINEEEVADK NAYNAKSTAE VGNEIINITS PNTSDALQGN  240
QPADETLIVE MVNGGNPRVQ SWQVSDDELS NCIHNAMNSS DCISQTFASP EKIASVANGE  300
NCNDHCAINL QKFNNPEMTL VDPQRDDWHY QSVLSTLLKS SDQLTMGTHF QNFHQVSSFV  360
SWKKAGPTDC QRPRARNSKS LLKKVLFEVP RMHLEGLLES QEENDYKEGM RPEVDGNGMN  420
HVLSERRRRA KLNERFLTLR SMVPSTSKDD KVSILDDAID YLRKLEKRLR ELEAQREIID  480
IETRTKRSPQ DMVERTSDNY FNKTDNGKKP VVKKRKVCDI DAARVEINAD ALNGSSTNDV  540
TVTVSGKEVV IELKCPSTEG RVLKIMEAIS SLNLDFNSVQ STESDGTLYM TIKSKLKGPT  600
IVSAKKIKQT LQRVASKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	485	492	TKRSPQDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-162	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW09872