PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10058

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 307aa MW: 35548.7 Da PI: 5.9524

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10058	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd llv++++ + g+W++ a++ g++Rt+k+c++rw++yl OIW10058 19 RGPWTHEEDNLLVQYIADHDEGRWNLLAKRSGLKRTGKSCRLRWLNYL 66 89********************************************97 PP
2	Myb_DNA-binding	48.1	2.7e-15	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ OIW10058 72 RGNLTIEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNFWRT 115 788999**************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MSTLKSLSIS SEDDNELRRG PWTHEEDNLL VQYIADHDEG RWNLLAKRSG LKRTGKSCRL 60 RWLNYLKPDV KRGNLTIEEQ LLILELHSRW GNRWSKIAQH LPGRTDNEIK NFWRTKIQKQ 120 AKYLKIDINS IEFQDLIRHL WIPKLLQKAK ESFSSSISIQ NQTIPMPLDN DSQYSTIPTQ 180 IPCQGPCINE LSGPNHLEQH EQNSDSEHNN GSCISFSESA NISKVPNLLG YTINQFHGLG 240 ANDFGPLTYD GYDVNNCAYE MDTFNMASTN SDCQMLDSNW VNKDFACRMF DQTWSMDELW 300 QHSHLQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-62	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW10058