PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10263

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 433aa MW: 48828.9 Da PI: 8.4665

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10263	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00099	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF+ +L HirtH OIW10263 6 FVCKYCSKSFPCGKSLGGHIRTH 28 89*********999999999998 PP
2	zf-C2H2	11.6	0.00083	382	404	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k F++ L H r+H OIW10263 382 HECPICYKIFKSGQALGGHKRSH 404 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MEEKKFVCKY CSKSFPCGKS LGGHIRTHMT EERNNKNANA ECDDLNLDGV RMKKKRDLWS 60 EAGYVLRENP KKTMRFVHSN ATLEQQEEDE KFCKECGKGF PSLKALCGHM ACHSEKQKMV 120 MDNQSDTEEN CDILKHPKRS KRMRFKTLSN NQTYSSSVPL ANGSSSVSEV EQEQEEVAMC 180 LMLLSKDSSH KGPFGFVTES SENNSVVVEA AKSSSVDMRV GAKNGNKFVS NGYDLVEKVS 240 NDEFKSEFED YNVESRKMLS MNKGRSKCAL TVLKKKSVMG NLDYDRNEGT TRKFDSRKTT 300 NCDYHGHSKK TENMFDSDEI YETGKKGWNN ESLAYDSIDE SDENSSDTDS FPAPKYHSSK 360 VLNGKKCSKA KKKLKSKKSR EHECPICYKI FKSGQALGGH KRSHFVGGSK ENTVVINQGP 420 RLIDLNLPAP VDE

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MEEKKFVCKY CSKSFPCGKS LGGHIRTHMT EERNNKNANA ECDDLNLDGV RMKKKRDLWS  60
EAGYVLRENP KKTMRFVHSN ATLEQQEEDE KFCKECGKGF PSLKALCGHM ACHSEKQKMV  120
MDNQSDTEEN CDILKHPKRS KRMRFKTLSN NQTYSSSVPL ANGSSSVSEV EQEQEEVAMC  180
LMLLSKDSSH KGPFGFVTES SENNSVVVEA AKSSSVDMRV GAKNGNKFVS NGYDLVEKVS  240
NDEFKSEFED YNVESRKMLS MNKGRSKCAL TVLKKKSVMG NLDYDRNEGT TRKFDSRKTT  300
NCDYHGHSKK TENMFDSDEI YETGKKGWNN ESLAYDSIDE SDENSSDTDS FPAPKYHSSK  360
VLNGKKCSKA KKKLKSKKSR EHECPICYKI FKSGQALGGH KRSHFVGGSK ENTVVINQGP  420
RLIDLNLPAP VDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	7e-38	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW10263