PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10273

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 215aa MW: 24320.9 Da PI: 7.0681

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10273	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	9e-06	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+ksF+++ L H++ H OIW10273 63 FPCKFCDKSFPNPQALGGHQNAH 85 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MSDTLYIGSL SDRKYKQKID GSSIIDEDSN LSLSLSLGGN YVDPTLVEKY NDNEVIKSKE 60 QQFPCKFCDK SFPNPQALGG HQNAHRRERI LSKMEKEFFR SGVGLGGLPC PYSSMINHQH 120 FGGPPLYHGT QMQPMATMYP MPWHNFEHGN GNRGLYNTSF SPNQFEMTPN SWGISAENRQ 180 RTNQRGVGVG YEHDQVPTTN HDSDGLQGNY YPRNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25160.1	1e-10	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW10273