PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10364

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 296aa MW: 33187.1 Da PI: 8.1597

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10364	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00033	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C++sFs+ L H++ H OIW10364 4 HKCKLCSRSFSNGRALGGHMKAH 26 79******************998 PP
2	zf-C2H2	12.7	0.00039	197	218	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cgk F+++ L +H + + OIW10364 197 ECENCGKKFRSSRALGSHRSIC 218 5*****************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MERHKCKLCS RSFSNGRALG GHMKAHLATL PLPPKPQTFH DPFESASFSY QSYSSQDEER 60 DILGSHEKAP SYGWSENPRK SLRYADPEFS FNNNGFVVVV QDRENETGSK KPFRQRSKRN 120 RKSSLNKSLE EEPKKFKHSF MESPPLSSVS DFSPEDVAMC LMMLSRDKWE SNVVEGDGVK 180 EEEMKLKNKK RIGGKNECEN CGKKFRSSRA LGSHRSICCS DEAGGGRGDK IFECPFCFKV 240 FGSGQALGGH KRSHLMLQQS LSSSNANNNK ESFIDLNLPA PIEDDDLTIV SDVSDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	119	RQRSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	3e-34	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW10364