 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OIW10577 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
| Family | YABBY | ||||||||
| Protein Properties | Length: 224aa MW: 25181.6 Da PI: 4.8439 | ||||||||
| Description | YABBY family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | YABBY | 211.2 | 3.5e-65 | 6 | 171 | 2 | 166 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslk.eelleelkveeenlksnvekeesastsvs 97
++f+ +eq+CyvqC+fC+til+vsvP +s+++vvtvrCGhCtsllsvn++kas +lla+ shl+ + + ++ + ee+++++ ++++ s
OIW10577 6 HLFDLPEQICYVQCGFCTTILMVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASfvplHLLASLSHLEVIADlSNFMPKESSPEEDINKTLNSYNA-----S 101
7899***********************************************99888899999999876443123333333444444443333333.....3 PP
YABBY 98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166
+++ + +e++ +p v++PPekrqr Psaynrfik+ei+r+ka+nPd++h+eafs+aaknWa fP+
OIW10577 102 MMTYsDCEEEDVIPINNVVNKPPEKRQRTPSAYNRFIKDEIKRLKAENPDMTHKEAFSTAAKNWANFPPT 171
3333134566667766779*************************************************85 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 224 aa Download sequence |
MSTLNHLFDL PEQICYVQCG FCTTILMVSV PCSSMSMVVT VRCGHCTSLL SVNMMKASFV 60 PLHLLASLSH LEVIADLSNF MPKESSPEED INKTLNSYNA SMMTYSDCEE EDVIPINNVV 120 NKPPEKRQRT PSAYNRFIKD EIKRLKAENP DMTHKEAFST AAKNWANFPP TQCKGDDENC 180 SQTEPLLDLD SHVDPNDAEV NEEGQGFRGR KIPRNSILGR MPFE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G23420.1 | 2e-65 | YABBY family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIW10577 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|