PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW10613
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 225aa    MW: 25731.1 Da    PI: 7.6357
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW10613genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF901.2e-28959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              k+i+n + rqvtfskRr+g++KKA+ELSvLCda++a+iifsstgkl+eyss
  OIW10613  9 KKIDNITARQVTFSKRRKGLFKKAKELSVLCDADIALIIFSSTGKLFEYSS 59
              68***********************************************96 PP
2K-box52.62e-18911721899
     K-box  18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
               + ++++L+ke+ +  +++R++ GedL+ L++ eLqqLe+ Le++l ++ +kK e ++++i +lq k  +l een++L++ +e
  OIW10613  91 NSNYTRLRKEVAEKSHQLRQMRGEDLHGLDIDELQQLERSLEDGLGRVIQKKGEKIMNEITDLQTKGMRLMEENERLKQHVE 172
               56799*************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MAREKIQIKK IDNITARQVT FSKRRKGLFK KAKELSVLCD ADIALIIFSS TGKLFEYSSS  60
SMKEILERHH LHSKNLSKME QPSLELQLVE NSNYTRLRKE VAEKSHQLRQ MRGEDLHGLD  120
IDELQQLERS LEDGLGRVIQ KKGEKIMNEI TDLQTKGMRL MEENERLKQH VENITNGQRH  180
ECENLVGEED QSSGSVTNIC NSTGSPRDYS DSSNTSLKLG LPYQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-108MIKC_MADS family protein