PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10836

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 310aa MW: 35195.4 Da PI: 7.9386

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10836	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00083	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++F++ L H++ H OIW10836 4 HKCKLCSRTFPNGRALGGHMKGH 26 79******************988 PP
2	zf-C2H2	13.9	0.00016	204	225	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +Cgk+F+++ L +H + OIW10836 204 KCDKCGKTFRSSRALGSHKTIC 225 7**************9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MERHKCKLCS RTFPNGRALG GHMKGHFAIL PLPPKPQSVT THTHSASLSS FDDDDDEEEK 60 CMIYELRENP KKSFRLADPK FSFPSDTSSV VQDRESETES KNPTRKRSKR NRKWNQNLEQ 120 NKKGKLSLME LSPVSSVSET WPEEDVAMCL MMLSRDTCKK KNTIVEEQEE QEQEVEEEKV 180 KPKGLNLEKN NMELKRVSGK HNNKCDKCGK TFRSSRALGS HKTICSRDDD DKNKIFECPF 240 CYKVFGSGQA LGGHKRSHLI QSSNASNHST TTTTTTTRFK DTFIDLNLPA QTEEDNLSVV 300 SDADFIHSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	2e-42	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW10836