PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10883

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 209aa MW: 23106.3 Da PI: 7.6427

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10883	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.6e-05	36	58	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H OIW10883 36 YTCTFCRREFRSAQALGGHMNVH 58 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MWNPREHPED DDSWEVRAFA EDTKNIMGTT WPPRSYTCTF CRREFRSAQA LGGHMNVHRR 60 DRARLHQAPS STGSINPSSS HIAPAFINIP HQDLDSNAGL RFLYHFPSPN ATFTTAPNHS 120 SNRSASGKSP STLLSISSYS QNNLKLQTCS STLNFPAAQA TASGINNNVS SYCYNSTSKV 180 EEPPTSSNDN GQHEELDLEL RLGNKPKPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17810.1	4e-34	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW10883