PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10925

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 232aa MW: 25599.2 Da PI: 8.4196

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10925	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	96.9	2.1e-30	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C+vlr++C+++C+l+p++ p++q ++ +v+k+FG++ ++++++++p ++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e++l OIW10925 2 SCNGCRVLRKGCSESCILRPCLqfidtPEAQGYATVFVAKFFGRAGLMSFISNVPVTQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQSAVETVL 102 6***********************************************************************************************99887 PP DUF260 97 l 97 + OIW10925 103 R 103 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MSCNGCRVLR KGCSESCILR PCLQFIDTPE AQGYATVFVA KFFGRAGLMS FISNVPVTQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQSAVET VLRGGTLRPM PELLALDAPT 120 HVADDASEGE VTCTDMWRLR DPNPNFRFTS SRSKVSSGVK RKRSEEIADL DLRLTPSFVQ 180 NSPAYSCRRD IRRPGTPSMN SEESVTTTAC LDSGLVDRYA QGRDRKVLNL FI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67420.1	2e-79	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW10925