PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10939

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 320aa MW: 35086.5 Da PI: 7.9896

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10939	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.2	8.9e-19	14	59	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+++G+++W++I++ ++ gR++k+c++rw + OIW10939 14 RGPWSPEEDASLQNLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59 89****************************.*********985 PP
2	Myb_DNA-binding	56.6	5.8e-18	67	110	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++ OIW10939 67 QAFTPEEDETIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 110 78*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MNTSITRKDM DRIRGPWSPE EDASLQNLVE KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL 60 SPQVEHQAFT PEEDETIIRA HARFGNKWAT IARLLSGRTD NAIKNHWNST LKRKCASFMI 120 DELEVNPQPL KRSVSAGAAM PVSTGLYMNP PTPGSPSGSD VSESSVPVAS SSHVYRPVPR 180 TGGVLIETTS SSNDPPTSLS LSLPGLDSSS EVSNRVTVSD YSASAPIQLN TASLLSPIMA 240 EPVSTVAPME VRQKEVHDLR SMAAFNFNGE LLAVMQEMIR KEVRSYIEEQ NGMCFQAAGD 300 GFRNASVKSI EKQDRFVNIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-80	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW10939