PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW11024
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 238aa    MW: 27692.9 Da    PI: 9.9224
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW11024genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.54.1e-29959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              k ien +nrqvt+skRrngi+KKA+ELSvLCd +v++i+fs+++k++ey+s
  OIW11024  9 KLIENPTNRQVTYSKRRNGIFKKAHELSVLCDSKVSLIMFSKNNKMHEYIS 59
              569**********************************************86 PP
2K-box53.51e-1876179699
     K-box   6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLe.sLslkeLqqLeqqLekslkkiRskK........nellleqieelqkkekelqeenkaLrk 96 
               g   l+++++e++ ++l+kLk+ +++L+r++Rh++Ge+++ +L++++L++Le+++ +s+ kiR++K         +++++ +++ +kk ++l++ n +L  
  OIW11024  76 GDIdLWHSHYEKMLENLKKLKDINHKLRRQIRHRIGEGMDdDLNFQQLRSLEEDMVSSIGKIRERKikgtkeakFHVIKTRTDTCRKKVRSLEQMNGNLLL 176
               43359**********************************737**********************9722222222579999****************99988 PP

     K-box  97 kle 99 
               +l+
  OIW11024 177 ELK 179
               776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGRGKIEIKL IENPTNRQVT YSKRRNGIFK KAHELSVLCD SKVSLIMFSK NNKMHEYISP  60
GFTTKKVLDQ YQKTLGDIDL WHSHYEKMLE NLKKLKDINH KLRRQIRHRI GEGMDDDLNF  120
QQLRSLEEDM VSSIGKIRER KIKGTKEAKF HVIKTRTDTC RKKVRSLEQM NGNLLLELKE  180
KCVIHPQFLL HDEGDPESAV AQANGASNLY AFCQHHTHLN LQHHGDDPGF KIDDLRLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.11e-61MIKC_MADS family protein