PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11238

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 888aa MW: 98825.5 Da PI: 8.1477

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11238	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47	4.5e-15	271	317	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn Er+RRdriN+++ L+el+P + K +Ka++L A+eY+ksLq OIW11238 271 VHNLSERKRRDRINEKMRALQELIPRC-----NKSDKASMLDDAIEYLKSLQ 317 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 888 aa Download sequence
MELLWQNGEV VMQSQSHRPM RKPPPLPPSR ISGGAIPAGT SIRPEAVNYN NTQNLFMQED 60 GITSWLHYPM DDPPLDQTFC TDLLYAPPPT VNANNHKDDN NNSIAMQKFG RNSQLTELRK 120 CQKSVASRPP IPPPRRTEQA APANTSNFSK HNAITEPGPS SSSRNIARES TMVDSCDTPF 180 LAAEAAVSRF SEQTEGDGGR KSMSAATTSS PGGSSSSGEI DRKLTAEDRK RKGRVEAVEW 240 ESQSEDVDFE SAEAKKQIRG SSTKRSRAAE VHNLSERKRR DRINEKMRAL QELIPRCNKS 300 DKASMLDDAI EYLKSLQLQV QMMSMGCGMV PMMFAGMHPY MPAMAMGMGM GMDMGMNRPV 360 MPFPNVLAGS ALPAATAAAH LGPRFPMPPF HMPHVPAPDS SQMQATNQSD NSMLNSVGTP 420 VLNQSCIPNF NSPYQYLGPH QMQFQLMQNQ AMNQLNVNKP STSRAPENPE HHQSAALLGQ 480 LEFCEVVLDI KPSLAIEVDS EGRCPLHLAS FEGHIKVVKS LLFTNSDVCF IRDKDGNLPI 540 HLAVSRGHIG VIEELIIAKP ESIGMITNDG SVLHLCVMYN HFEALNLLLQ LVRGSQQQVL 600 NFKDKEGNTV LHLAVRLRHI KTIKHLLSLP EIRKAANTLN KAGHTVLDML DLSQRDFISL 660 IIEQILIEVG AQRSTNIAIT YSQNMANEVE SHRQSRWKRL ENFWSKYLQY QGNWIEETRG 720 TLMVVATVIA TMTFQSALNP PGGVWQENTQ SGGNKCTTYG ICEAGTAVVG YVWSEDYIRF 780 MAFNTISFYA SLSVVLVLIN GFPLKNKVIM WILTIVMTIA VTFMFLTYMW ALGLVTPHHI 840 YSRLYKLAYI CVGAWGIILI VIGLIQTAQL VFWIKNRRKN FNIGPEQV

Sequence ? help Back to Top

Protein Sequence Length: 888 aa Download sequence

MELLWQNGEV VMQSQSHRPM RKPPPLPPSR ISGGAIPAGT SIRPEAVNYN NTQNLFMQED  60
GITSWLHYPM DDPPLDQTFC TDLLYAPPPT VNANNHKDDN NNSIAMQKFG RNSQLTELRK  120
CQKSVASRPP IPPPRRTEQA APANTSNFSK HNAITEPGPS SSSRNIARES TMVDSCDTPF  180
LAAEAAVSRF SEQTEGDGGR KSMSAATTSS PGGSSSSGEI DRKLTAEDRK RKGRVEAVEW  240
ESQSEDVDFE SAEAKKQIRG SSTKRSRAAE VHNLSERKRR DRINEKMRAL QELIPRCNKS  300
DKASMLDDAI EYLKSLQLQV QMMSMGCGMV PMMFAGMHPY MPAMAMGMGM GMDMGMNRPV  360
MPFPNVLAGS ALPAATAAAH LGPRFPMPPF HMPHVPAPDS SQMQATNQSD NSMLNSVGTP  420
VLNQSCIPNF NSPYQYLGPH QMQFQLMQNQ AMNQLNVNKP STSRAPENPE HHQSAALLGQ  480
LEFCEVVLDI KPSLAIEVDS EGRCPLHLAS FEGHIKVVKS LLFTNSDVCF IRDKDGNLPI  540
HLAVSRGHIG VIEELIIAKP ESIGMITNDG SVLHLCVMYN HFEALNLLLQ LVRGSQQQVL  600
NFKDKEGNTV LHLAVRLRHI KTIKHLLSLP EIRKAANTLN KAGHTVLDML DLSQRDFISL  660
IIEQILIEVG AQRSTNIAIT YSQNMANEVE SHRQSRWKRL ENFWSKYLQY QGNWIEETRG  720
TLMVVATVIA TMTFQSALNP PGGVWQENTQ SGGNKCTTYG ICEAGTAVVG YVWSEDYIRF  780
MAFNTISFYA SLSVVLVLIN GFPLKNKVIM WILTIVMTIA VTFMFLTYMW ALGLVTPHHI  840
YSRLYKLAYI CVGAWGIILI VIGLIQTAQL VFWIKNRRKN FNIGPEQV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	281	ERKRRD
2	875	880	KNRRKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	6e-48	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW11238