PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11332

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 363aa MW: 40184.9 Da PI: 8.1175

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11332	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.8	6.2e-26	144	187	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrg++rsrk++e OIW11332 144 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGKNRSRKPVE 187 79***************************************987 PP
2	QLQ	48.8	2.1e-17	73	109	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ Q+q+L+ Q+l+++y++a++ vP+eLlq+i+k OIW11332 73 SYFSLGQWQELELQALIFRYMLAGAAVPHELLQPIKK 109 789********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDFHMKQWRN QVQVHESEEQ QHCTKMPKLH PGSHQASATS SALPLFLPEP NTKISTLSDS 60 TLATTNRFPR MGSYFSLGQW QELELQALIF RYMLAGAAVP HELLQPIKKS LIFSPTTTPY 120 FLHHHSIQHY QPGAEWYWGR GAMDPEPGRC RRTDGKKWRC SRDVVAGQKY CERHMHRGKN 180 RSRKPVELPT PITIASSSSS ISSPSLATAS LKSPFDLIHL NQCPSGTKNE SKSLFETQDH 240 VGEDGRSGGN MLRHFFDDWP RSLQQSSDSG GRVNSVTCLT ISMPENTSSD VSLKLSTGYG 300 EEPCPRNGNV EPETEQVQVN WAGGWTSTNQ VASMGGPLAE ALRSSTSTSS PTSVLHQLHG 360 GSA

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDFHMKQWRN QVQVHESEEQ QHCTKMPKLH PGSHQASATS SALPLFLPEP NTKISTLSDS  60
TLATTNRFPR MGSYFSLGQW QELELQALIF RYMLAGAAVP HELLQPIKKS LIFSPTTTPY  120
FLHHHSIQHY QPGAEWYWGR GAMDPEPGRC RRTDGKKWRC SRDVVAGQKY CERHMHRGKN  180
RSRKPVELPT PITIASSSSS ISSPSLATAS LKSPFDLIHL NQCPSGTKNE SKSLFETQDH  240
VGEDGRSGGN MLRHFFDDWP RSLQQSSDSG GRVNSVTCLT ISMPENTSSD VSLKLSTGYG  300
EEPCPRNGNV EPETEQVQVN WAGGWTSTNQ VASMGGPLAE ALRSSTSTSS PTSVLHQLHG  360
GSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-83	GRF family protein

Link Out ? help Back to Top
Ensembl	OIW11332