PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11390

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-YA

Protein Properties

Length: 641aa MW: 69951.9 Da PI: 6.4257

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11390	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	96.9	2.3e-30	158	214	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++I++RRq+Rak+ +kl +k rkpy+heSRh+hA+rRpRg+gGrF OIW11390 158 DGPIYVNAKQYHGIIRRRQSRAKAVLANKL-TKRRKPYMHESRHRHAMRRPRGCGGRF 214 57**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MQSVSHKEHE GIAHNSVGRL SHGSSAPWWS AFASQSAYGE SSGQMKPFSL EIPNYVDQLA 60 ATKQSARGAE QVFGKRHTTQ FTIFPDVCKM SGDSPKLQTF ISPQTSLANT NTRFELGFSQ 120 PMICAKYPYA DQFYGLFSTY GPQISGRIML PLDMTSDDGP IYVNAKQYHG IIRRRQSRAK 180 AVLANKLTKR RKPYMHESRH RHAMRRPRGC GGRFLNTKNS ANGNAKTGTE VNIACGQQLY 240 SSGSQGSEIL QSEVGTLNSS KETNGSSPNI SGSEVTSMYL HGGLDSFTFN HLGSADVHSL 300 ADMIDGGRGI VMPTKWVAAG ASVSTVISNR IFNFSYTHSP ISLPTNFCLR PISHKPLNLI 360 LNSQSFNLYP LSLHSLHPPF ASEFDGVEVA QDVITEGTQE DEPEPELELE PENFEKPPEK 420 EEKNGPESND GGRLYVGNLP YSLTSNQLAE LFGEAGTVAS VEIVYDRVTD RSRGFGFVTM 480 SSVEEAKEAI QMFDGSQVGG RTVKVNFPEV PRGGERLVMG PKLQNNYRGF VDSPHKIYAG 540 NLGWTVTSEG LKDAFDQQPG ILSAKVVYER DSGRSRGFGF VTFETADDAD AALEAMNGVE 600 VQGRALRLNL AAMRAPSSHP SVEENTESYA DSSELVSSAS T

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MQSVSHKEHE GIAHNSVGRL SHGSSAPWWS AFASQSAYGE SSGQMKPFSL EIPNYVDQLA  60
ATKQSARGAE QVFGKRHTTQ FTIFPDVCKM SGDSPKLQTF ISPQTSLANT NTRFELGFSQ  120
PMICAKYPYA DQFYGLFSTY GPQISGRIML PLDMTSDDGP IYVNAKQYHG IIRRRQSRAK  180
AVLANKLTKR RKPYMHESRH RHAMRRPRGC GGRFLNTKNS ANGNAKTGTE VNIACGQQLY  240
SSGSQGSEIL QSEVGTLNSS KETNGSSPNI SGSEVTSMYL HGGLDSFTFN HLGSADVHSL  300
ADMIDGGRGI VMPTKWVAAG ASVSTVISNR IFNFSYTHSP ISLPTNFCLR PISHKPLNLI  360
LNSQSFNLYP LSLHSLHPPF ASEFDGVEVA QDVITEGTQE DEPEPELELE PENFEKPPEK  420
EEKNGPESND GGRLYVGNLP YSLTSNQLAE LFGEAGTVAS VEIVYDRVTD RSRGFGFVTM  480
SSVEEAKEAI QMFDGSQVGG RTVKVNFPEV PRGGERLVMG PKLQNNYRGF VDSPHKIYAG  540
NLGWTVTSEG LKDAFDQQPG ILSAKVVYER DSGRSRGFGF VTFETADDAD AALEAMNGVE  600
VQGRALRLNL AAMRAPSSHP SVEENTESYA DSSELVSSAS T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	192	RRRQSRAKAVLANKLTKRRK
2	173	193	RRRQSRAKAVLANKLTKRRKP
3	174	194	RRRQSRAKAVLANKLTKRRKP
4	199	208	RHRHAMRRPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06510.2	4e-58	NF-YA family protein

Link Out ? help Back to Top
Ensembl	OIW11390