PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11455

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 952aa MW: 107069 Da PI: 6.7899

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11455	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	887	909	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H ++ H OIW11455 887 QCPQCGAKFSSVTTLVDHVQKvH 909 7******************9988 PP
2	zf-C2H2	11.2	0.0012	926	947	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+C++ F ++ L+ H + H OIW11455 926 CPKCSRGFVDPVALVEHVERdH 947 *****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
MGNCCATPQV PPGETKKKNK NKKENPFAID YGNGTVSTAT KLTVLSNPTG EEIELRYELG 60 RELGRGEFGI TYLCTDKESS EEFACKSISK KKLRTAIDIE DVRREVEIMR HLPKHPNIVT 120 LKDTYEDGNA VHLVMELCEG GELFDRIVAR GHYTERAAAA VTKTIVEVVQ MCHKHGVMHR 180 DLKPENFLFA NKKETAALKA IDFGLSVFFK PGERFNEIVG SPYYMAPEVL KRNYGPEVDI 240 WSAGVILYIL LCGVPPFWAE TEQGVAQAII RSVVDFKRDP WPKVSDNAKD LVKKMLDPDP 300 KRRLTAHEVL EHPWIQNAKK APNVSLGETV KARLKQFSVM NKLKKRALRV IAEHLSVEEA 360 AGIKEGFQVM DTGNRGKINM DELRVGLHKL GHQVSDEDIK ILMEAGDVDN DGYLDYGEFV 420 AISVHLRKIG NDEHLHRAFQ YFDEDQSGYI EIEELRKALS SEVETDSEDV VNAIMHDVDT 480 DKDGKISYDE FATMMKAGTD WRKASRQYSR ERFNSLSLKF DPDPKRRLTA HEVLEHPWIQ 540 NAKKAPNVSL GETVKARLKQ FSVMNKLKKR ALRVIAEHLS VEEAAGIKEG FQVMDTGNRG 600 KINMDELRVG LHKLGHQVSD EDIKILMEAG DVDNDGYLDY GEFVAISVHL RKIGNDEHLH 660 RAFQYFDEDQ SGYIEIEELR KALSSEVETD SEDVVNAIMH DVDTDKVYCL DHRSYTNHQC 720 TKGNKQDVTV VICPLCAKSV RLIPDQDPNI TWEHHVNTDC DPSNFEKVTK KKRCPATGCR 780 EILVFSNTIK CRDCMVDHCL KHRFGPDHKC PGPKKSESSF SFTNPFNRSA NEESKPNSTP 840 AASSKWTSSL LNMASNIRAS AEQAWQTAID GVGQSSGSGN RNDQLEQCPQ CGAKFSSVTT 900 LVDHVQKVHE RNGNRSKVKK VPVAACPKCS RGFVDPVALV EHVERDHGGS SR

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

MGNCCATPQV PPGETKKKNK NKKENPFAID YGNGTVSTAT KLTVLSNPTG EEIELRYELG  60
RELGRGEFGI TYLCTDKESS EEFACKSISK KKLRTAIDIE DVRREVEIMR HLPKHPNIVT  120
LKDTYEDGNA VHLVMELCEG GELFDRIVAR GHYTERAAAA VTKTIVEVVQ MCHKHGVMHR  180
DLKPENFLFA NKKETAALKA IDFGLSVFFK PGERFNEIVG SPYYMAPEVL KRNYGPEVDI  240
WSAGVILYIL LCGVPPFWAE TEQGVAQAII RSVVDFKRDP WPKVSDNAKD LVKKMLDPDP  300
KRRLTAHEVL EHPWIQNAKK APNVSLGETV KARLKQFSVM NKLKKRALRV IAEHLSVEEA  360
AGIKEGFQVM DTGNRGKINM DELRVGLHKL GHQVSDEDIK ILMEAGDVDN DGYLDYGEFV  420
AISVHLRKIG NDEHLHRAFQ YFDEDQSGYI EIEELRKALS SEVETDSEDV VNAIMHDVDT  480
DKDGKISYDE FATMMKAGTD WRKASRQYSR ERFNSLSLKF DPDPKRRLTA HEVLEHPWIQ  540
NAKKAPNVSL GETVKARLKQ FSVMNKLKKR ALRVIAEHLS VEEAAGIKEG FQVMDTGNRG  600
KINMDELRVG LHKLGHQVSD EDIKILMEAG DVDNDGYLDY GEFVAISVHL RKIGNDEHLH  660
RAFQYFDEDQ SGYIEIEELR KALSSEVETD SEDVVNAIMH DVDTDKVYCL DHRSYTNHQC  720
TKGNKQDVTV VICPLCAKSV RLIPDQDPNI TWEHHVNTDC DPSNFEKVTK KKRCPATGCR  780
EILVFSNTIK CRDCMVDHCL KHRFGPDHKC PGPKKSESSF SFTNPFNRSA NEESKPNSTP  840
AASSKWTSSL LNMASNIRAS AEQAWQTAID GVGQSSGSGN RNDQLEQCPQ CGAKFSSVTT  900
LVDHVQKVHE RNGNRSKVKK VPVAACPKCS RGFVDPVALV EHVERDHGGS SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	7e-80	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW11455