PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11680

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 364aa MW: 41794.3 Da PI: 4.6397

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11680	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.1	3.6e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l+ +++ G ++W+++++ g+ R++k+c++rw +yl OIW11680 16 RGPWSPEEDLKLIAFIHKNGHENWRAVPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	48.6	1.8e-15	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ ++++++ +G++ W++Ia++++ gRt++++k+ w+++l OIW11680 69 RGNFTIEEEQSIIKLHNDFGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGKGRAPCCD KTKVKRGPWS PEEDLKLIAF IHKNGHENWR AVPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTIEEEQSI IKLHNDFGNK WSKIASCLPG RTDNEIKNVW NTHLKKRLIV 120 KSSESSADES KMESSITSSS SSESFSTNEE PNLAKTIPNS ELNEQAFQVT MNEKIEHDSE 180 KHVSNEVISI IEDPKDSSTY SFSFVESNIL NSNHIVPFTQ EQQLCSPLTY LGPYNIDNNN 240 INNTLQEVDK PNNLIEIPWD SDEDFWKLID NFESLQSSEV QLEGDPSNQT PNHVQESVQD 300 GENMKWTHEF DNEFGERNES NKDQFLPKNY AAELGVDPHT FDFDVMEKPE SELDLRNIQL 360 WLMA

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGKGRAPCCD KTKVKRGPWS PEEDLKLIAF IHKNGHENWR AVPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTIEEEQSI IKLHNDFGNK WSKIASCLPG RTDNEIKNVW NTHLKKRLIV  120
KSSESSADES KMESSITSSS SSESFSTNEE PNLAKTIPNS ELNEQAFQVT MNEKIEHDSE  180
KHVSNEVISI IEDPKDSSTY SFSFVESNIL NSNHIVPFTQ EQQLCSPLTY LGPYNIDNNN  240
INNTLQEVDK PNNLIEIPWD SDEDFWKLID NFESLQSSEV QLEGDPSNQT PNHVQESVQD  300
GENMKWTHEF DNEFGERNES NKDQFLPKNY AAELGVDPHT FDFDVMEKPE SELDLRNIQL  360
WLMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	2e-82	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW11680